Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0044800

Sequence Length

250 nt

GC Content

0.2960

GCAAACAGGAUCCUGUUAUGUGAAUAACUAAGGUGAGACAGUGCAAGUUCUUAUGAUUGUUCAAACAAUUUAAUGCAAAUUUUAGGUUAAAGUACAAGUGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUACCAGCAAGUGUCUUGACAAGGAUCACAUAUAAAUAAAUGGAUCAGUGGAGUCUCCACUACUGAUGCUUUCUACGUCUCAAAACCACAGCUCAACAGAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-29.50 kcal/mol

Ensemble Metrics

Free Energy: -34.34

Frequency: 0.0004

Diversity: 65.78

Structure Visualization

Structure Prediction

MFE Structure Prediction

(...((((....)))))((.((.....((..((((((((.((((.....((((.((((((..............)).)))).)))).....))))................................................................(((((((....)))).)))............(.((((((((........)))))))).).......)))))...)))..)).....)).))

Thermodynamic Ensemble Prediction

,(..{{{|.,,.}||||,{{({.....{...{{((((((.{(((,....,{{{.((((((....},}}}},,,,}},.,,,.}}}},.,,,|||,.............................................................,,,({{{|||....}}||{|}|,{........},|,|||(((((,...,,},))))))}),)}},....)))))}...})..,),...,}}))}