Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_LRP1B_0047000

Sequence Length

363 nt

GC Content

0.3829

GGACCAAUUAGGUAACUAUUACAGUAAUCCUAGGAUAAAUGAUAAGGACGGAGAUGUUAUUGGUAAAAGUAGUUGGAUAAGAGGGUUUGGGGAGUGAGGAGUUCAGGUCGAAGGAAUAUUGCAGAUGUAAAAUUAAUAGGACUUGGUGAUUGGUUAGACUCAGGAAUGAGAAAUGCAGAAAUGCCUGGCAGCAAGUUGGAGAGGUGGGUGUGAAAAUUUGAGAAGUCUAAAUUGGAACAAAUGAACUAAGAUUCAUCAACUCAGAGGUGAAAUCUUGAGAGUUUAUGAGAUCUUCUUGAAGAGCGUGAUUAAGAGUGGAGACCUAGCAAGAAAAUGAAAGUCUAAAGAAUGUCAAAAUCGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-56.30 kcal/mol

Ensemble Metrics

Free Energy: -65.20

Frequency: 0.0000

Diversity: 125.62

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((...((((.((((...((((((......(((.......((.((.......)).)).......))).......))))))......))))..))))((((((..(..(((.((((....)))).)))..)..)))))).)))))))))...((((....))))....(((....)))(((((.....)))))...(((...(((...(((((((....)).)))))...))).....)))(((((((((.(((((.(((((...)))))..))))).)))).))))))((...((...((((.........((((....((......))...)))).......))))...))..))

Thermodynamic Ensemble Prediction

{{(((,,(((..{{((((({{(({{((((((.............,,}|,.,,...,)}}))}}}....,)))))}..}}|.,,}||||...,,.|,,....,{((((((..{..(((.((((....)))).)))..}..))))))},,,}},,||,,,((({....}}}}....(((....}||(({{(.....,}}},...|,|,|||||...,|{{{{{,..,}}}}}}}}...,},.{{{{{{{((((((((({,,,,,..,||}},,}))))..,))))})),}}})))}||||..{{...{,{|,.....|..{{||}|..|{......}}..,}))).......})))...))....