Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0001500

Sequence Length

245 nt

GC Content

0.4857

GUUCCCACAUUUCUCCCUUUUGAUCUCUGUCUCUCUGUUCAGAUGGCUGUCACAGUUUAAUAAUUCUGGAGGGUCUAUCCCCUACAGAUUUAUGUCUCCCUGUCUCUCCUCUUAUUCACCCCAUGGUGCAUUCAGAAUCCCGUUUUCGUGCCUCCCUGGGUUGUCAUUUCUCAGGCUCUGGCUCCUUGGCCUGGUUUACUUCAUGGUGCUGGAUCUGCCCCGUCACUUCUUGUUCAGCUUCUUCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.30 kcal/mol

Ensemble Metrics

Free Energy: -50.72

Frequency: 0.0002

Diversity: 45.87

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(..(((..((........))....)))......)..)(((.(((((..((((....((((.((((.((((......)))).)))).))))......)))).............((.((((.((.((((...(((.......)))))))..)).)))).)).......(((((((..(....)..)))))))..........((((.(((.......))).)))).......)))))...)))

Thermodynamic Ensemble Prediction

(..,..{{,..,,........||....|||......,..)|||.(({{(..((((....((((.((((.{(((......)))}.)))).))))......}})}.............{(.((((.((.((((..,(((.....,})),))))..)).)))).}}.......{((((((..(....)..))))))}..........(({({{((....,..)}).}}},...,)}.))))}...}))