Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0005000

Sequence Length

283 nt

GC Content

0.3428

AUCUUUUCUCUCCACACUACUACUCACCUUGAAUGGAGUUCUGUUUUCUAAUCUUUCAUUCACUAUUGUUUGCUUCAUUCACUUAUAUACACUGUAUAAUAGUCUUUAUAGCAUAAAACAUACAAUAUAUAGCAGUUUCUCUUGUUGACCCAAAGAAAGGAUCAGAUUUAAACUCUUCUUUGCUCCUGCAACCUGAGUCUUUUUCAGGUGGGAGAAGUUCCUGGAAAGAGGACAUGUAGUUUUUUUGGUUUAGUCCUUAUCAUUUUUUGGAAUGUUGCUAUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.00 kcal/mol

Ensemble Metrics

Free Energy: -54.18

Frequency: 0.0000

Diversity: 90.06

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((...((((....(((.(((.((.(((((((((...............)))))))))....((((((((......(((..(((((...)))))..)))......))))...))))..........((.(((((......((((.((.......)).))))....)))))))....(((....)))(((((((.....)))))))))))).)))...)))).))))))..((((((.............(((..(......)..))).....)))))).

Thermodynamic Ensemble Prediction

.((({{({{.((((....{((.(((.((.(((((((((....,....,....,}}})))))}.,,,{((,((((......(((..(((((...)))))..)))......)))}...,}}}.,,,,,,..,{({({......,}}}||,.,{,,|||,,||,}}||,.....,|||,,,,|{((....))}{((((({.....)))))))))))).)))...)))).))))))..((((((......,,.....{||..,...,,.,..))),,,..)))))).