Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0005100

Sequence Length

250 nt

GC Content

0.4200

UGCCAGGUUAUGACCCUCAUAAGAAACUCCAUAGUCGCCGGGCAUGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGACGCCGAGGCUGGCGGAUCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGACAGGUGAAACUAGUGAAUAUUCGCAAUGAUGACAUCACAGAUGGCAACCCCAAGUUGACCCUGGGUCUGAUCUGGACCAUUAUUUUGCAUUUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.20 kcal/mol

Ensemble Metrics

Free Energy: -57.65

Frequency: 0.0007

Diversity: 32.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((.(((((................((((((((....))))))))..(((((((..((((((....))))))(((((....)))))............................................................)))))))......((((....))))..((((...)))).....((((((.....)))).))..)))))))))))))..))((.............))

Thermodynamic Ensemble Prediction

(,((((((((.(((((.,....|,........((((((({....))))))))..(((((((..((((({....})))))(((({....}))))............................................................)))))))......((((....|}}}..,||,...,})},.,..((((((.....)))).))..))))))))))))),,,,,..............,)