Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0005200

Sequence Length

274 nt

GC Content

0.5474

UGCCAGGUUAUGACCCUCAUAAGAAACUCCAUAGUCGCCGGGCAUGGUGGCUCACGCCUGUAAUCCCAGCACUUUGGGACGCCGAGGCUGGCGGAUCACGAGGUCAGGAGAUCCAGGCCAUCCUGGCCAACAUGGUGAAACCCCAUCUUUACUAAAAAUACAAAAAUUAGCCGAGUGUGGUGGUGCGUGCCUGUAGUCCCAGCUCCUCAGGAGGCUAAGGCAGGAGAAUCGCUUGAAUCCAAGAGGCGGAGGCUGCAGUGAGCUGAGAUCAUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-83.20 kcal/mol

Ensemble Metrics

Free Energy: -88.98

Frequency: 0.0001

Diversity: 85.96

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(((((((....((....)).....))))...))).))))(.(((((((.(((((....((((((....))))))(((((....)))))..((((.(((((((((...........))))))))....).)))).((((((((((..((((...........))))..))).)))).))).(.(((((.(((((((.........)).)))))))))).).......((((....)))))))))..((((......))))))).)))).)

Thermodynamic Ensemble Prediction

((((.((((((({...||,...,......,,,},,.))).))))(.((((((((((((({{..((((({....}))))}{(((|.,,.}))}},,(({(.,{{{{{(({|..,...,,}.))))))))..,,,,))),.((((((((((..((((...........))))..))).)))).))),(.(((((,(((((((.,,..,,..||,}}|}}||||}.}.....||||||..,,).,})))))}.)))}}}})}},)))))).)))).)