Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0007900

Sequence Length

229 nt

GC Content

0.4716

AUGAACGGGACCGGGUUCAGAAGAAAACGUUCACCAAGUGGGUCAACAAGCACUUAAUGAAGAUCUCUGACAUCUACAUUAGUGGAGAAUCAGGGGAUAUGUCAGCCAAGGAGAAACUACUCCUGUGGACCCAGAAGGUGACAGCUGGUUACACAGGAAUCAAAUGCACCAACUUUUCCUCCUGCUGGAGUGAUGGGAAGAUGUUCAAUGCACUCAUUCACCGAUACCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-57.50 kcal/mol

Ensemble Metrics

Free Energy: -61.24

Frequency: 0.0023

Diversity: 50.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((...(((.(((....))).....(((((...((((((.((..........(((...(((((((..(((((....)))))...))))))).....)))....(((((......))))))).))))))...)))))((((.((......(((((................))))))).))))(((((....(((....)))....))))).....)))...)))

Thermodynamic Ensemble Prediction

.....(((...(((,(({....}},..,..(((((...((((((.,{...,.,,...{{|..,(((((((..(((((....)))))...))))))},,...}}|.,..(((((......)))))}},))))))...))))}((((.((......(((({................))))))).))))(((((....(((....)))....))))).....)))...)))