Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0009900

Sequence Length

171 nt

GC Content

0.4971

CCCCGGGAGAAGGGCAGGAUGCGUUUUCAUAGGCUGCAGAAUGUGCAGAUUGCCCUGGACUUCCUAAAGCAGCGACAGGUGAAACUAGUGAAUAUUCGCAAUGAUGACAUCACAGAUGGCAACCCCAAGUUGACCCUGGGUCUGAUCUGGACCAUUAUUUUGCAUUUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-42.10 kcal/mol

Ensemble Metrics

Free Energy: -46.19

Frequency: 0.0013

Diversity: 22.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((........)))(.(((((((.((((((..(((((.(((.((.(((......))).))))).....))))).....))))))...((((....))))(((((((...((.(((((.(..((((..((......)))))).).))))))).))))))).))))..))).)

Thermodynamic Ensemble Prediction

(((........)))(.(((((((.((((((..((((({({{.((.(((......))).))}),,}...))))).....)))))),..((((....))))(((((((...((.(((((.{,,{{((,,.{......,))))}.}.))))))).)))))))..)))..))).)