Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0016200

Sequence Length

432 nt

GC Content

0.4861

GAUGCUGCUCACCUGGAAUCAGGACAACCGGUACAAUGUGAGUCAGAUGUCAUUAUGUACAUUCAGGAGUGUGAAGGUCUCAUCAGGCAGCUGCAGGUGGAUCUCCAGAUCCUGCGGGAUGAGAAUUACUACCAGCUAGAAGAGCUGGCUUUUAGGGUCAUGCGUCUUCAGGAUGAGCUGGUCACCUUGCGUCUAGAGUGUACAAACCUGUACCGGAAGGGUCAUUUCACUUCACUUGAAUUGGUUCCACCCUCUACUUUAACCACCACUCAUCUGAAAGCAGAACCCUUAACCAAGGCAACCCAUUCUUCUUCUACCUCCUGGUUCCGAAAGCCUAUGACUCGGGCUGAACUUGUGGCCAUCAGCUCCUCUGAAGAUGAAGGCAAUCUCCGAUUUGUGUAUGAACUACUGUCUUGGGUAGAAGAGAUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-121.90 kcal/mol

Ensemble Metrics

Free Energy: -129.46

Frequency: 0.0000

Diversity: 155.81

Structure Visualization

Structure Prediction

MFE Structure Prediction

....((((((.((((....))))....((((((((..((((........))))..((((((((((((.((((((.((.((((((....(((((..(((((.((((...((((....)))))))).)))))..))))).(((((((((((((...)))))).)).)))))..))))))))..))))...)).))).)))))))))....)))))))).(((((....(((.(((....))).)))....)))))...................((((....))))..((((....))))...........((((((((((...(((((....(((((.......))))))))))....(((.(((.((.......)).))).))).......(((..((......))....)))..)))))))))))).))))

Thermodynamic Ensemble Prediction

....((((,,.((((....))))....{(((((((..((((........))))..{{({((((({(({{((((({(((((((((....,,((({{(((((.,,,|}}.,,||}}}})))))))).,,,,,.{|||||.(((((((((((({...||||}},||.}}}||..||||||}|||}.,},,,}},}}}.)}))}||||....))))))}},(((((....(({.(((,..,||}.|||,...}}}}}.......,,,,),,,,)))||)))}.}})},))))}|.....,||....,,..,,,{{{(({((({,|.|((((....(((((.......)))))))}}}.}.}|{{.(({,{{,....}.,},})}.}}},,,,...|||..||,,....,},,,,))),,)))))))))))}.))))