Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0017200

Sequence Length

250 nt

GC Content

0.4120

GGUCAUGCGUCUUCAGGAUGAGCUGGUCACCUUGCGUCUAGAGUGUACAAACCUGUACCGGAAGGGUCAUUUCACUUCACUUGAAUUGGUUCCACCCUCUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCUCAGCCCCUGGAUUGAGGAAACUCGGGCACUAAUAGCACAGUUACCCUCUCCAGCCAUUGAUCAUGAGCAGCUCAGGCAGCAACAAGAGGAAAUGAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.30 kcal/mol

Ensemble Metrics

Free Energy: -50.30

Frequency: 0.0077

Diversity: 30.48

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.((((.(.......).)))).)(..(((((((((((((.(((((((((....))))).(((.((((....(((.(((....))).)))....)))))))..................................................(((((....(((((..((((.((((.(.((.......)).)))))..)))))))))..........))))).)))))))).))).....)))...))).)

Thermodynamic Ensemble Prediction

(.((((.(.......).)))).)(..(((((((((((((.(((((((((....))))).((,{((((....(((.(((....))).)))....)))))))..................................................(((((....(((((..((((.((((.{.((.......)).)))))..))))))))).....,....))))).)))))))).))}....})))...))).)