Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0023000

Sequence Length

250 nt

GC Content

0.3720

UGGGAGUUUUGGAGAGAGGGAAGAUUAAACUUACGGAUUUAAUGCCUCCUAUUUAACUGAUGUCCUGGCUUCUAGUUUUCCAUCCUGUUCUUUAUAUCUCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGUUGGGUAGGACAGGCAGAAAGAGCACUGGCAGGCCACCAAGGCAGAACCACCCAGCAGGAUCUCUCUGCUUUGCAGAAGAACCAAAGUGACUUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.10 kcal/mol

Ensemble Metrics

Free Energy: -47.60

Frequency: 0.0007

Diversity: 71.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((..((.(..(((.((((.(((((((........)))))).).)))).)))..).))..)))..)((((.((((...........................................................................(((((((.((.(((((.......)).)))....(((.....)))....))))))))).((.(((.(((((...)))))))).)).....)))).))))

Thermodynamic Ensemble Prediction

(((,.{(((((({(,({(({{.{((({{{,,...,}.)))}}).}})))).,,,..,....,,..{((((((((((,(((...((((((((...,,.{,.....................................................|.|||,,))))))))..,...},}.))))).)))))},}}})))....)))|}||||,((.(((.(((((...)))))))).))....,},)},}..)