Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0023500

Sequence Length

250 nt

GC Content

0.3440

GGUCGAACAAUCUUAUCAGAAGGUUAUGGCCCUUUGGCAUCAGCUGCAUGUUAACACCAAAAGCCUUAUCUCUUGGAACUAUCUGCGUAAAGACCUUGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAGUAAGGGAACUCUGGUGGAAGAAAUCAAUUGCAAAGGUACUUCUUUAGAAAAUCUCAUCAUGGAAAUCACAGCACCUGAUUCCCAAGGCAAGACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.01 kcal/mol

Ensemble Metrics

Free Energy: -37.22

Frequency: 0.0011

Diversity: 68.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((..(((....)))..))).)))))((((((.(((((.(((.(((.....(((...........(((.((((.(((((..((((...(((((.........................................................)))))((..(((......)))..))..))))..))))).))))..)))...........))).....)))))).)))))..))))........))

Thermodynamic Ensemble Prediction

((((((((..(((....}))..))).)))))((((((.{({((,{{{.{||,....{{{,..{{{{,..,{,|,||.....{((......}}}||,,|........................................................|,,|||((,.(({{{{{,,|||..||..,|},..|||}..})))}},||...,}}.....,}}...,,}},})),)})))},))))},,.....))