Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0025700

Sequence Length

250 nt

GC Content

0.4040

CACACCCAGGAGGAUUUACAGCAAUUGAGGUCAGACUUGGAUGCAGUUUCUAUGAAAUGUGACAGCUUUCUCCAUCAGUCUCCAUCUAGUUCAAGUGUCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCUAAGGAGCAAUAUGAGGCGCUCCAGGAAGAGACACGUGUGGCCCAGAAGGAACUGGAGGAAGCAGUGACCUCCGCCUUACAGCAGGAGACUGAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-44.53 kcal/mol

Ensemble Metrics

Free Energy: -48.74

Frequency: 0.0011

Diversity: 71.41

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...(((((..(((((.((.....)))))))...))))).))(.(((((...)))))((.((.((((((((((...((.(((.(((.((((....(((...................................................)))....)))).......((.(((.((.(........).)).)))))))).))))))))))))))).)).))((((((......)).))))........)

Thermodynamic Ensemble Prediction

(,,,.(((((..(((((.({{...|}))))))...))))).)){.{(({(...,,,,,||,{{.|(((({{{,.,{(((,(((.{((.({,{,.{,{{{...................................................,||,..{{|||.......,..}}})},,{..{,|,|||.||{,}||{||}.}}},))))}))}})),)),}}|||{{|,,....)}.))))}}})}}},)