Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0028300

Sequence Length

431 nt

GC Content

0.4455

AAAUUGAGAGAAAUCAGACAAAACUGGAUCAAUGUCAAAAAUUUUCCCAGCAGUACUCUACUAUUGUAAAGGACUAUGAAUUGCAACUGAUGACAUACAAGGCCUUUGUGGAAUCGCAGCAGAAAUCCCCUGGCAAGCGCCGUCGCAUGCUUUCCUCUUCAGAUGCCAUCACUCAAGAGUUCAUGGACUUAAGGACUCGCUACACGGCAUUGGUGACUUUAACAACUCAGCACGUGAAAUACAUCAGUGAUGCACUCCGGCGUCUGGAGGAGGAGGAGAAAGUGGUAGAAGAGGAGAAACAAGAACAUGUGGAGAAGGUUAAAGAACUUUUGGGCUGGGUGUCUACCCUAGCGAGGAAUACACAAGGAAAAGCUACCUCAUCCGAGACCAAAGAAUCAACAGACAUUGAAAAAGCUAUUUUGGAACAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-91.50 kcal/mol

Ensemble Metrics

Free Energy: -102.79

Frequency: 0.0000

Diversity: 129.32

Structure Visualization

Structure Prediction

MFE Structure Prediction

((............(((......)))..((((((((...((((((((((.((((.((((((((((.((((((.((.((...((((.....)).))..)).)))))))).(((.((......))..)))...((((.(((....))).))))((((((((((((((((((((((......((((((..(((((((..((((((........))))))))))).......))..)))))).......)))))).......))))))).))))))))).....))))))))).............).)).))))).)))))))...((..(((((((((((((....)))).)))((((...................))))........))))))..))....))))))))........))(((......)))

Thermodynamic Ensemble Prediction

({.,{{{......}|||......||}..((((((((...{{(((((((,,(({{.,(((((((({.,,{(((.{{.{{..,{{(,...,,|}.|}|,}|.},}})))|||...|}}},,|||...,,,.}}|(((.(((....))).)))|((((((((((((((((((((((...{{{(((,({..,,{{{||}}||{{{,,,,,,,..}|||}},}}},.......}),.))))},.......)))))),......}))))))))))))))))}.,..})))))))}.,.|,.....,....,}.))))).)))||}}...,|.,{((((((((((({....,)))}))){{{{.........,.......,.)))}..,,,,,.))}}},..,,....))))))))....,...})(((......)))