Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0028600

Sequence Length

250 nt

GC Content

0.3760

GACUAUGAAUUGCAACUGAUGACAUACAAGGCCUUUGUGGAAUCGCAGCAGAAAUCCCCUGGCAAGCGCCGUCGCAUGCUUUCCUCUUCAGAUGCCAUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGCCUGGGUUGGCAAUAAAAAUCUUAUUCUGAACAGCAAGGGAUCUAACAGUGAAAUAGAUGUUGACAGCCUGAACCUCUGCCUCCAACAGUAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.20 kcal/mol

Ensemble Metrics

Free Energy: -37.85

Frequency: 0.0005

Diversity: 52.73

Structure Visualization

Structure Prediction

MFE Structure Prediction

(....(((...(((.((((.((.....(((((...(((((...(((..(((.......)))....)))...))))).)))))..)).)))).)))..)))...................................................((((...((((((.((((....((((..(((.......................)))..)))))))).))))))....)))).)(((.........)))

Thermodynamic Ensemble Prediction

(....{({.,.(((.((((.((.....(((((...(((((...(((.{(((.......))},|..)))...))))).)))))..)).)))).))).,))}...................................................((((..,((((((.(((({...,{{{.,{{({,...,,,..,,,.,},..,,,.,,,..)))))))).)))))),..,)))}|)(({.........)))