Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0028800

Sequence Length

250 nt

GC Content

0.4240

GACUAUGAAUUGCAACUGAUGACAUACAAGGCCUUUGUGGAAUCGCAGCAGAAAUCCCCUGGCAAGCGCCGUCGCAUGCUUUCCUCUUCAGAUGCCAUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCUAAGGAGCAAUAUGAGGCGCUCCAGGAAGAGACACGUGUGGCCCAGAAGGAACUGGAGGAAGCAGUGACCUCCGCCUUACAGCAGGAGACUGAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.67 kcal/mol

Ensemble Metrics

Free Energy: -50.98

Frequency: 0.0009

Diversity: 67.34

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((((.(((......)))..))))..((..((((.(((..(((((.......((.(((((..((((((.(((..(((..((((........(((......................................................)))..)))))))...))))))))))))))..))......))))).))).))))..))(((((.........))))).)(((....(((....)))..)))

Thermodynamic Ensemble Prediction

(.,{,{{.,{{,,....||}..}}}|,,{{.,((((,{((..{{{{{.,.,...||.(((((..{(((((.(((..((({,{(((,,,.....(((......................................................)))..}}))))}...,}})))))))))))..}}......}))}}.|||,}}}}..))||{||..,,,,},.)||||||{{{...,|{|,,,.)))..)))