Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0029000

Sequence Length

250 nt

GC Content

0.3800

GACUAUGAAUUGCAACUGAUGACAUACAAGGCCUUUGUGGAAUCGCAGCAGAAAUCCCCUGGCAAGCGCCGUCGCAUGCUUUCCUCUUCAGAUGCCAUCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUCUGGUAAGCUGCAGCAGUUCAUGGAAAACAAAAGUCGGAUGCUGGCCUCUGGAAAUCAGCCAGAUCAAGAUAUUACACAUUUCUUCCAACAGAUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-38.33 kcal/mol

Ensemble Metrics

Free Energy: -41.79

Frequency: 0.0036

Diversity: 38.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((((((((((....(((..((((.........))))..)))(((((.(((.......((((.(((....))).))))......)))...(((((........................................................))))).))))).))))))))))).........(((.(((.(((((............))))))))..))).............))(..........)

Thermodynamic Ensemble Prediction

({(((((((((((....(((..({((,{,....,,))))..)))(((((.{,,.......((((.(((....))).))))......,,}...{((({........................................................))))).))))).))))))))))).........{((.(((.(((({..,((,....,,))))))}}.,||}..........,},)}{..........)