Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0030300

Sequence Length

477 nt

GC Content

0.4382

UUCAUGGACUUAAGGACUCGCUACACGGCAUUGGUGACUUUAACAACUCAGCACGUGAAAUACAUCAGUGAUGCACUCCGGCGUCUGGAGGAGGAGGAGAAAGUGGUAGAAGAGGAGAAACAAGAACAUGUGGAGAAGGUUAAAGAACUUUUGGGCUGGGUGUCUACCCUAGCGAGGAAUACACAAGGAAAAGCUACCUCAUCCGAGACCAAAGAAUCAACAGACAUUGAAAAAGCUAUUUUGGAACAGCAGGUUCUGUCAGAAGAGCUGACAACAAAGAAAGAACAAGUCUCUGAAGCUAUUAAAACAUCACAGAUCUUCUUGGCCAAGCAUGGUCAUAAGCUCUCAGAAAAAGAGAAGAAACAAAUAUCUGAGCAAUUGAAUGCCCUAAACAAGGCUUACCAUGACCUUUGUGAUGGUUCUGCAAAUCAGCUUCAGCAGCUUCAGAGCCAGUUGGCUCACCAGACAGAACAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-104.50 kcal/mol

Ensemble Metrics

Free Energy: -115.14

Frequency: 0.0000

Diversity: 144.58

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((...(((((......((.(((((.(...(((...(((((..(..(((.((((((((......))).)).))).((((((...)))))))))..)...)))))................)))...).))))).)))))))...)))(((((..(((((((....)))).)))((((...................)))).(((((((........((((......))))........))))))).......((((((((.(..((((((((..................((((((((((.......(((((((((.(((..((((((....)))))).)))..((((((...................)))))).........(((........)))...........)))))))))(((..((......))...)))))))))))))...))))))))..).)))))))))))))

Thermodynamic Ensemble Prediction

(((...{{(((..,..{(({((({,.,.,.,||||||{{{{,,{..{{{..(({|((,....,,||}.}),))|.((((,,,.,||},,)}},,.}},,...}},,}.,..,.,......},....},)))},.}|||)))...)))||{{{,.(((((({....})))}))){{{{.........,.......,.)))}.(((((((........((((......))))........))))))).......{(((((((.(..((((((((................{.((((((((((.......(((((((((.,,{..((((((....)))))).,}|,{((({{,....,,,............)))}}|{........{{(........)))...,,,,,|,.}))))))))||,..{{......)).,.,),)))))))))),,.))))))))..}.))))))))}})))