Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0036300

Sequence Length

321 nt

GC Content

0.4455

GAGCUGGAGUGUGUGAAUCAGAUUAUCAUCAGCCAGCCUCAAGAAGUUCCUGCUCAACUGUUGAAGGCUCUAGAGAAAGAUGCCAAGAAUCUUCAGAAGUCUCUCAGCUCUGUGAGUGACACUUGGAAUUCCAGGCUACUCCACUUCCAGAAUGCUGUGGAAAUAGAAAAGACUAAAGUGUUAAAUCAGCACACACAGCUAGAAGGCCGACUUCAAGAUCUGAGAGCCUGGGUUGGCAAUAAAAAUCUUAUUCUGAACAGCAAGGGAUCUAACAGUGAAAUAGAUGUUGACAGCCUGAACCUCUGCCUCCAACAGUAUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.10 kcal/mol

Ensemble Metrics

Free Energy: -85.43

Frequency: 0.0000

Diversity: 99.18

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((((..((.((((.........)))))).))))).............).(((((((((((.((((...((((.(((((.......)))))....((.(((((((.((((((((((...(((((....))))).)))).))).........((((((....(((......)))..(((((.....))))).))))))..((((.....)))).))).))))))).))((((((.((((....((((..(((.......................)))..)))))))).))))))....)))))))).))))))).))))

Thermodynamic Ensemble Prediction

(((((((..{({({{(......}}.,)))},.))))),}}..,......,}.(((((((((((.((((...((((.{(((({{{,,..,},|{{{{..(,({(((({.{{{{||||{|,,.{{|||....|||||,|,|||,}},,,,,....((((((....,{(.....,|},..{{{||.....}}}}}.))))))..((((.....)))).}}}.}})))))}))}|||||}||,,.....|||}.}}|}}....,,.,{{..,||{,{{.......,},))))).,,,)))....)))})))).))))))).))))