Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0044200

Sequence Length

250 nt

GC Content

0.3920

AGAGAAAGAUGCAUCAUCUUGCCAGGAACAGUUGGAUGAAUUCCGGAAGCUGGUCAGGACCUUCCAGAAAUGGUUGAAAGAAACUGAAGGGAGUAUUCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCUAGAAAAACUGCAGCCAUCCUUUGAGGCCUUGAAGCGCCGUGGAGAGGAGCUUAUUGGACGAUCUCAGGGAGCAGACAAGGAUCUGGCUGCAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-47.00 kcal/mol

Ensemble Metrics

Free Energy: -51.20

Frequency: 0.0011

Diversity: 46.60

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((...))))))(((((......(((((.....)))))...)))))..(((.(((((.....(((((......)))))..)))))...)))................................................................((((((((((((((((((((...((((.((.......)).))))...))....)))))..........)))))..))))))))....

Thermodynamic Ensemble Prediction

.....((((((...))))))(((((......(((((.....)))))...))))},.({{.(((((.....,((((......))))}..})}}}...)))................................................................(((((((((((((,,.,,((((((,(({((...{{{....,))}...)).}}.},))))))..}....))))),.))))))))....