Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0052800

Sequence Length

377 nt

GC Content

0.4430

GUUUUUGCUAAUGAAGUAAAUGCUCAUCGAGACCAGAUCAUUGAGCUGGAUCAAACUGGGAAUCAAUUAAAGUUCCUUAGCCAAAAGCAGGAUGUUGUUCUGAUCAAGAAUUUGUUGGUGAGCGUGCAGUCUCGAUGGGAGAAGGUUGUCCAGCGAUCUAUUGAAAGAGGGCGAUCACUAGAUGAUGCCAGGAAGCGGGCAAAACAAGAGUUUCAGAAGACUCUUGGUGGCAAGCAGCCUGUGUAUGAUACCACAAUUAGAACUGGCAGAGCACUGAAAGAAAAGACUUUGCUUCCCGAAGAUAGUCAGAAACUUGACAAUUUCCUAGGAGAAGUCAGAGACAAAUGGGAUACUGUUUGUGGCAAGUCUGUGGAGCG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-102.80 kcal/mol

Ensemble Metrics

Free Energy: -109.62

Frequency: 0.0000

Diversity: 106.46

Structure Visualization

Structure Prediction

MFE Structure Prediction

...((((((.....))))))(((((....((((..((((.........)))).....((((((........))))))..(((.....(((..((((((((((((..........(((((((.(((.(..(.((((((((.(..((....))..)..)))))))).)..).))).)))))))((.((((((((..((..((....(((((((((....)))))))))...))..))..)))).)))).))......)))))))).)))).....)))..........(((((((((((..((((.(((((....))))).))))....)).)))).)))))((((((((....)))))))))))..))))...)))))

Thermodynamic Ensemble Prediction

,..((((((.....}}}},|((((({{{{(((({{(,((...||.}}}}.}}...,,((((((........)))))).,|{{...,{{{{,.{,||{{|{{|,{|,|...,,},|||||||,|||.{..({(({{{{{|,|..(({{{{||..|..||},}})).,,.)})))})),}},,((.((((((((..((..((....(((((((({....}))))))))...))..))..)))).)))).)).............||,}||{,,..)|}..,,....,.(((((((((((..{(((.(((({....})))).)))),...)).)))).))))){(((((((....))))))))))),,)})}|,.}})))