Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MACF1_0053000

Sequence Length

233 nt

GC Content

0.3262

GUAGGGAGUGGUUACAGUAAAUGAAAAUAGAAAACUGGAAUUAGAAAUCCUAGAAAUGAGUAAACUGCCUGCAGCAUUCUAGAGGAUGUGUGUUUUGUGGGUUUAACUUAAAAUAUGGUCAGAUUAUUAAUUGGAAAAGUCACAUUCUUGAAAUACAAAUAGAAAUUGACUGAUAGGCUACCACCGGAAUAAACAGCUUUUGUUCCCAAUUUUUAUAUUAUUUUUGCCUUUCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.50 kcal/mol

Ensemble Metrics

Free Energy: -42.24

Frequency: 0.0005

Diversity: 60.04

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((.(((...(((((((((((((......(((((........))).)).............((((((((((((((((((((((((..((((.(((((((.(((........))).))))......))).))))..)))))))))..........)))))..)).))).))))).......((((((((.....))))))))..)))))))).)))))...))).))).

Thermodynamic Ensemble Prediction

.....(((.(((...(((((((((((((.,....({(({........)}),)}...{{{((,....((((((((((((({{{{||||||{..{{{|,|||||{|.|||,,.....,|||.||,}|,,,...,,.,}}|,,||}}||||}..........}))))..)),))),)))})}}}},..((((((((.....)))))))),.)))))))).)))))...))).))).