Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MBNL1_0000700

Sequence Length

495 nt

GC Content

0.4808

AGGAAAAAAAAUAAUGUAACUAGAGAAGAGAGUUGAGCAGAGAACUGAGCUCUUUGAAGUGCUGGUAGUUUGUCUCAACCCAUGAAGCAGCUUAACAAGCAACUAUAACUAAGCAUAGAGGGCCGUUGCUCCAGGGAGAACUGCAAAUAUCUUCAUCCACCCCCACAUUUAAAAACGCAGUUGGAGAUAAAUGGACGCAAUAACUUGAUUCAGCAGAAGAACAUGGCCAUGUUGGCCCAGCAAAUGCAACUAGCCAAUGCCAUGAUGCCUGGUGCCCCAUUACAACCCGUGCCAAUGUUUUCAGUUGCACCAAGCUUAGCCACCAAUGCAUCAGCAGCCGCCUUUAAUCCCUAUCUGGGACCUGUUUCUCCAAGCCUGGUCCCGGCAGAGAUCUUGCCGACUGCACCAAUGUUGGUUACAGGGAAUCCGGGUGUCCCUGUACCUGCAGCUGCUGCAGCUGCUGCACAGAAAUUAAUGCGAACAGACAGACUUGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-127.30 kcal/mol

Ensemble Metrics

Free Energy: -136.52

Frequency: 0.0000

Diversity: 152.00

Structure Visualization

Structure Prediction

MFE Structure Prediction

..................(((((...((((((((.((.......)).))))))))......)))))(((((((((...(.(((..(((((((......(((.......((((((...(((((...((((...((......))))))...)))))......................(((((((((((((..((((((........((...((.(((.....((((((...((((((...((....)).....))))))))))))....))).))...))........))).))).))))))))))))).....)))))).......)))..(((((((.((.....(((.((..((((((((.((((....))))..)))))))).)).)))...((((((.........))))))((((((((..(...)..))))))))...)).))))))).)))))))............))).)...)))))))))....

Thermodynamic Ensemble Prediction

(((({..............,,,,...{(((((((.((.......)).)))))))}..,|{|||}||{{||{((,({{.....}}}.|}}(({{...,}))..}}....,,,,}},}.((((((.((((((.{{(,,.,..}|}....,{{{{{{{.....................{,,|,||||||||..(((,,({.....,{((...(({(,(,,,,,((((((...((((((,,,((,.,,||.....}}}}}))))))}.}|,}))||)},...........,)}}))}.)))))))}))))},.,,,|,,,.}}..}},..}}...)))))).))))))..((((.....)))}....}))))(((((.(({,{{.((((((.....}))))).{,{{{,{{.,||,|||{(((((((..,...}..))))))))}}.||{{{||.,,))))}))|{{{..........)))}...,)}))).)))).)