Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MBNL1_0010400

Sequence Length

266 nt

GC Content

0.4474

AAGUCACAGAAAGCUUUUAUGGCUGAAUAGUUCAACCUCACCUAGGGCCGUUGCUCCAGGGAGAACUGCAAAUAUCUUCAUCCACCCCCACAUUUAAAAACGCAGUUGGAGAUAAAUGGACGCAAUAACUUGAUUCAGCAGAAGAACAUGGCCAUGUUGGCCCAGCAAAUGCAACUAGCCAAUGCCAUGAUGCCUGGUGCCCCAUUACAACCCGUGAACUUUAUGCAACAAUCAUUUCAAAAAAGAGUGGGGGAUUGCAUUUCAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-55.30 kcal/mol

Ensemble Metrics

Free Energy: -60.44

Frequency: 0.0002

Diversity: 47.35

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((........))))((.(((((((((((((....(((.(((.((((....)))).))))))...(.((..((((((((..........................))))))))..)).)......))))..))))))).......((((((...((((((...((....)).....))))))))))))((((..(((.(((((((........((((.................))))......))))))).)))))))..))))

Thermodynamic Ensemble Prediction

((((........))))((.,{((((((({(((,...(((.(((.((((....)))).))))))..,|,{,..((((((((........................,.))))))))..}}.,..|,...,,},,))))))).......((((((...((((((...((....)).....)))))))))))){(((..{((.(((((((........((({....{(,......,,,,}))).....,))))))).))}))))..,,})