Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MBNL1_0015900

Sequence Length

561 nt

GC Content

0.3725

GUUUGAAGAAAUUUCUCUUAGAGCAAAGAUGAAGGAGCAGCUGUUCCCAACAGGAUCCGUAAACAAAUGAAUGUGGACAAUGAAGGUGUUGUUCUAAAGAGAAUGGAGGUGUAAAGGCCUUGUAAAAGAAGGACAGUGUGCCAAGUCAGGAAACGAUGAUGGCUGAGAACCAACUCAGAAACCCUUGUGAUGUUAAUCUGUAGCAAAGCUGGACAAAGUCAAAGCCCAUGCAGGAGAACAGGCAGAAUUCAAUAGCCAUUUAAGAAAGAAAUGAGAGGCUCAACUGGAGAAGUACUGCCAAAGAUAUGCUGCAAUCGUGAAUUAUUAAAAUUGAUUUUUGUCUAUUUCAUAAGUUUUCUCAAAGCAGUUCUGAUAAAAAGGUUCAGAUUCUGAACAAUAGCCACAUUUGUAGAAGAAGAGGCAUUACUUUGCAGUGUUGUAGGUUUAGAAGAAGAGGUUUUUUUGACAUGCCAGAAAAAUCUGUUUCAAGCUCUUAUAGUCAAUUAGGUGUGUUUGGUAUGUAUAUAUUUAACUAAAUUCUGUUUCUUAGCAAUAAUCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-114.60 kcal/mol

Ensemble Metrics

Free Energy: -127.23

Frequency: 0.0000

Diversity: 204.21

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((.......((((((((((((((.......(((....(((((...)))))..)))((..(((......)))..))..........))))))).)))))))..(((((......))))).....(.((((.......((((.(((.......)))..))))((((......)))).....)))).)(((....))).....)))).(((((...............(((..(((((...((((((((....((((.((((.........)))).))))..((((..((((((.((((.........((((((..(((..((((((.(((((..(((((...................)))))))))).))))))....((((((...))))))......)))..)))))).......)))).)))))).))))((((((((.......(((.(((((((((((......))))))))))).)))......))))))).)..((((((((((.........))))))))))...))))))))))))).)))....)))))

Thermodynamic Ensemble Prediction

,(((,...,,,.((((((((((((({.......((({{..,,|||}}.,}||,..|||((..(({......))),.))........,.)))))))}}}))))}..(((((.,....}||||.......|}||.,...,,|{|,.{(({,....,||),,}}||((((......)))}|,,,.,|||,||,((({..{(({({.,,..(((.(((...}))..}))...}||}}},.}}}}{(((({{((,...((((.((((.........)))).))))..,,||,|,,,{{{|||||,.,.,,,,,(((({,..{{({,,{,{{{,{({,{{{,,,,)}}.}}}}.,,,}},,},}.,,,,})))}|{{{|.......,,||||,,{||||||....{{,|{,,||||||{..{{..,,,.}),})))))))))}|}},,}}}}}}}}{{(,(((((((((((......))))))))))).}}},..{{,,,,,.}},....}}})}||,}}}}}}},}}}},..,,,,,...,})}))))))))),))}....})},,