Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MBOAT2_0007400

Sequence Length

428 nt

GC Content

0.5023

CUUUACUCCUGAAGUCAGUCAGACCAUGAACCCACUGGGAGGAAUGAGCAAGUCCAGAUGCACUGCCUUUAUGAACUGUAACAGUCACCGCAAAGGUCUACAGCUUCACUCCUGAAGUCAGUGAGACCACGAACCCACCGGGAGGAAUGAACAACUCCAGACGCACCGCCUUUAAGAGCUGUAACAGUCACCACGAAGGUCUGCAGCUUCACUCCUGAAGUCAACAAGGCCACGAACCCAUCAGAAGGAAGAAAGUCCGGACACGUCCGAACAUCAGAAGGAACAAACUCCGGACACACCAUCUUUAAGAACUGUAACACUCACUGCAAGGGUCCGCGGCUUCAUUCUUGAAGUCAGCUUGACCAAGAACCCACCAAUUCCAGACACAUUUUGGUGACCACAAAGGGACCACUGAUUAUCGCCAAGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-103.30 kcal/mol

Ensemble Metrics

Free Energy: -111.87

Frequency: 0.0000

Diversity: 70.69

Structure Visualization

Structure Prediction

MFE Structure Prediction

.((((...((((......))))....))))..((((.((.(((((.((...((((...((((..((((((.((.(((((.(((((.........(((((((.((((((....))))))..)).))))).((.......))((((..........))))...................))))).)))))...)).)))))).))))((((((....)))))).....(((((.((.((((.((..(((((.(...(((((((....(((...........)))......)))))))....).)))))..))..((((........)))).)))).)).)))))..((((((..((((...))))))))))..((((((.............)))))).........))))..)).))).)).)).))))

Thermodynamic Ensemble Prediction

{((..{({((,.{{{..,{||,....))),,.,|||}|}}}.,,,}||{,.{({{...((((..((((((.((.(((((.(((((.........((((({(.((((({....})))))..})}})))).{,.......}}((((..........)))).,..{,...)}.,,...}.))))).)))))...)).)))))).))))((((((....)))))).....(((((.((.((((.{(..(((((.,...(((((((...,(((...........))).,....)))))))....,.)))))..}}..((((........)))).)))).)).)))))..{(((((..((({...}))))))))}..((((((.............))))))........,)},,..}}.,,,.}).}},}}))