Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0000800

Sequence Length

259 nt

GC Content

0.6139

GCAGAGAAAGGCAAUGCCAGGGUCAAGCAGCUCAAGAGGCAGCUGGAGGAGGCAGAGGAGGAGUCCCAGCGCAUCAACGCCAACCGCAGGAAGCUGCAGCGGGAGCUGGAUGAGGCCACGGAGAGCAACGAGGCCAUGGGCCGCGAGGUGAACGCACUCAAGAGCAAGCUCAGAGGGCCCCCCCCACAGGAAACUUCGCAGUGAUGCACCAGGCGAGGAAACGAGACCUCUUUCGUUCCUUCUAGAAGGUCUGGAGGAC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-81.70 kcal/mol

Ensemble Metrics

Free Energy: -87.00

Frequency: 0.0002

Diversity: 45.25

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((((..(((...))).((((((..((((((..(..((((((...((.(((.(..((...((....))...))..))))..))......))))))..)..))))))..)))((((.((........)).))))..((((((((.......))).(((..(((....))).))))))))..)))........((((((.(((...)))...))))))..........))))))((.(((.(((((...))))))))))

Thermodynamic Ensemble Prediction

(.(((({..(((...))).{(((((..((((((..(..((((((...{(.(((.{.,((...,|,,..}}.,.})..})))..)).,....))))))..)..))))))..))}((((.((........)).))))..((((({((.......})).{{{..(((....))).)})))))),|||,...}}...((((((.{((...}}},,.))))))......,,,}))))))({{(({{(((((...))))))))))