Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0003000

Sequence Length

491 nt

GC Content

0.6191

GCCGAGCAGCUCAGCAACGAGCUGGCCACAGAGCGCAGCACGGCCCAGAAGAAUGAGAGUGCCCGGCAGCAGCUCGAGCGGCAGAACAAGGAGCUCCGGAGCAAGCUCCACGAGAUGGAGGGGGCCGUCAAGUCCAAGUUCAAGUCCACCAUCGCGGCGCUGGAGGCCAAGAUUGCACAGCUGGAGGAGCAGGUCGAGCAGGAGGCCAGAGAGAAACAGGCGGCCACCAAGUCGCUGAAGCAGAAAGACAAGAAGCUGAAGGAAAUCUUGCUGCAGGUGGAGGACGAGCGCAAGAUGGCCGAGCAGUACAAGGAGCAGGCAGAGAAAGGCAAUGCCAGGGUCAAGCAGCUCAAGAGGCAGCUGGAGGAGGCAGAGGAGGAGUCCCAGCGCAUCAACGCCAACCGCAGGAAGCUGCAGCGGGAGCUGGAUGAGGCCACGGAGAGCAACGAGGCCAUGGGCCGCGAGGUGAACGCACUCAAGAGCAAGCUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-167.40 kcal/mol

Ensemble Metrics

Free Energy: -175.48

Frequency: 0.0000

Diversity: 136.50

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((....(((((......))))))))(...((((...(((((((((.............(((((((.(((..((.(..(....)..).))..))))))).)))..(((((.....))))).)))))))........(((....((.((((.(((((((.(....((((..(.((((...(((.((........)).))).((.((((..............)))).))..(((.(((...)))...))).....((((..((..(((((((.((..((.....))..)))))))))..))...))))..........((((..(.....)..)))).((.(((..((((((..(..((((((...((.(((.(..((...((....))...))..))))..))......))))))..)..))))))..)))..)).......)))))..))))..).))))))))))).))..))).....))..)))).)

Thermodynamic Ensemble Prediction

(((....(((((......))))))))(...((((...{{.(((((({............(((((((.{{{,,(({,..{....}..}.,},,))))))).))}.{((((......||,,,.,||||||{..{{....((((..{({({((,(((((((.{(((.((((....{{{(.,.{((,,,....},,.)}.,)),}..,(((...........}}})))).))}.)})))|}..{{{{..,|||.....,{{,..{,..,||||||}||.}||}}.}})),,)))),,)))}}))...)),,....}}}}}.((((..{.....}..))))....(((..((((((..(..((((((...{(.(((.{.,((...,|,},.}},,.}}..})))..)).,....))))))..)..))))))..))}((((.((........)).)))).})))))),||||||...,},)),....))..)))).)