Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0004200

Sequence Length

442 nt

GC Content

0.6312

GAACGCACUCCAGGACGAGAAGCGCCGCCUGGAGGCCCGGAUCGCCCAGCUGGAGGAGGAGCUGGAGGAGGAGCAGGGCAACAUGGAGGCCAUGAGCGACCGGGUCCGCAAAGCCACACAGCAGGCCGAGCAGCUCAGCAACGAGCUGGCCACAGAGCGCAGCACGGCCCAGAAGAAUGAGAGUGCCCGGCAGCAGCUCGAGCGGCAGAACAAGGAGCUCCGGAGCAAGCUCCACGAGAUGGAGGGGGCCGUCAAGUCCAAGUUCAAGUCCACCAUCGCGGCGCUGGAGGCCAAGAUUGCACAGCUGGAGGAGCAGGUCGAGCAGGAGGCCAGAGAGAAACAGGCGGCCACCAAGUCGCUGAAGCAGAAAGACAAGAAGCUGAAGGAAAUCUUGCUGCAGGUGGAGGACGAGCGCAAGAUGGCCGAGCAGUACAAGGAGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-153.30 kcal/mol

Ensemble Metrics

Free Energy: -159.58

Frequency: 0.0000

Diversity: 139.51

Structure Visualization

Structure Prediction

MFE Structure Prediction

....((.(((((((.((........)))))))))((((...((..((((((........))))))..))......))))..(((((...)))))((((((..(((((((.........((((..((((..((((((......))))))(((.(.((((((.((..((((((......))...).)))..)).)).))))..).))).......((((((........))))))....(((((.((((((......))))..........)).))))).))))))))..((((....((((.((.(((......))).).).))))..))))............))))..)))..))))))..................((((..((..(((((((.((..((.....))..)))))))))..))...)))).......))..

Thermodynamic Ensemble Prediction

,...{{.(((((((.((........)))))))))(((({,.((,{((((((........))))))..,,....,.}}))..(((((...))))).)))})|}|}|{{((...(((.....,,.}||,..}|{((((......}}))}|(((,,.,,((((.({,((((((.............{|||{{|,.||.||||..,,},,....,..||||||}}}}.}},.,||||,.....|||}}.||||}}},..||||.........(((,((,||{((((,,|{{.((((....,{{{.,.{((,,,....},}.)},,)),,..,(((...........))))))).))}.)))))},..{{{{..,{,,.....,,{,..,,..,|||||}}||.}}}}},}}))..)))),,}})})))..,),}}....,)})).,