Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0005100

Sequence Length

333 nt

GC Content

0.6577

GAACGCACUCCAGGACGAGAAGCGCCGCCUGGAGGCCCGGAUCGCCCAGCUGGAGGAGGAGCUGGAGGAGGAGCAGGGCAACAUGGAGGCCAUGAGCGACCGGGUCCGCAAAGCCACACAGCAGGCCGAGCAGCUCAGCAACGAGCUGGCCACAGAGCGCAGCACGGCCCAGAAGAAUGAGAGUGCCCGGCAGCAGCUCGAGCGGCAGAACAAGGAGCUCCGGAGCAAGCUCCACGAGAUGGAGGGGGCCGUCAAGUCCAAGUUCAAGUCCACCAUCGCGGCGCUGGAGGCCAAGAUUGCACAGCUGGAGGAGCAGGUCGAGCAGGAGGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-119.20 kcal/mol

Ensemble Metrics

Free Energy: -124.07

Frequency: 0.0004

Diversity: 80.64

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((((.((........)))))))))((((...((..((((((........))))))..))......))))........((((.((..(((((.(.(((....(((....((((.((((...((((.((((.....))))(((.(.((((((.((..((((((......))...).)))..)).)).))))..).))).......((((((........)))))).((.(((((.((((((......))))..........)).))))).))..))))..))))..).)))....)))...))).).)))))..))...))))..

Thermodynamic Ensemble Prediction

.......(((((((.((........)))))))))((((,..((.,((((((........))))))..)}....,.))))........((((.((..(((((.(.(((.{..,(({...{{{{.|(((,..((((((.,,...}}))))(((.(.((((((.((.{((({(,......,,.,.,.)})|})).)).))))..).))).......((((((........)))))).,,.(((((.{{((((......)))}..........)).))))).)))}))))..)))}....}))}...}}}...))).).)))))..))...))))..