Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0005900

Sequence Length

339 nt

GC Content

0.6254

GUCCAUGAGCUGGAGAAGUCCAAGCGGGCCCUGGAGACCCAGAUGGAGGAGAUGAAGACGCAGCUGGAAGAGCUGGAGGACGAGCUGCAAGCCACGGAGGACGCCAAACUGCGGCUGGAAGUCAACAUGCAGGCGCUCAAGGGCCAGUUCGAAAGGGAUCUCCAAGCCCGGGACGAGCAGAAUGAGGAGAAGAGGAGGCAACUGCAGAGACAGGCCGAGCAGCUCAGCAACGAGCUGGCCACAGAGCGCAGCACGGCCCAGAAGAAUGAGAGUGCCCGGCAGCAGCUCGAGCGGCAGAACAAGGAGCUCCGGAGCAAGCUCCACGAGAUGGAGGGGGCC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-113.20 kcal/mol

Ensemble Metrics

Free Energy: -118.27

Frequency: 0.0003

Diversity: 92.74

Structure Visualization

Structure Prediction

MFE Structure Prediction

((...((.(((.....))).)).))((.((((......(((..(.(.((((.......((.((((.......(((..(..((((((((..(((..((.(.((.(((..(((.(((((..........(((..((((((...((((((((((....((....))..((.((...)).))....((..(((..(....(((..(((......))))))...)..)))..)).))))))))))...)))))).))))))))))).....)).).)).)))))).))))))))..)..))).......)))).)).......)))).).)..))).)))).))

Thermodynamic Ensemble Prediction

,({,.{,.((((((....)))}.)){({((((,,....|||,.{.{.{{{{.......{{,((((.....,,|||..{..((((((((..(({.,((.(.{(.{{{..(((.(((((..........(((..((((((...((((((((((...,{,.,{{||..{{,{,...,,.,}....{{.,|{|..,....(((..(((......))))))...}..)))..),.))))))))))...)))))).)))))))))}}.....}}.}.)),))}))).))))))))..}..}})..,....}))),))..,,,..)))).}.,..))),,}})}))