Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0006800

Sequence Length

523 nt

GC Content

0.5736

AGCUGGAGGACGAGCUGCAAGCCACGGAGGACGCCAAACUGCGGCUGGAAGUCAACAUGCAGGCGCUCAAGGGCCAGUUCGAAAGGGAUCUCCAAGCCCGGGACGAGCAGAAUGAGGAGAAGAGGAGGCAACUGCAGAGACAGCUUCACGAGUAUGAGACGGAACUGGAAGACGAGCGAAAGCAACGUGCCCUGGCAGCUGCAGCAAAGAAGAAGCUGGAAGGGGACCUGAAAGACCUGGAGCUUCAGGCCGACUCUGCCAUCAAGGGGAGGGAGGAAGCCAUCAAGCAGCUACGCAAACUGCAGGCUCAGAUGAAGGACUUUCAAAGAGAGCUGGAAGAUGCCCGUGCCUCCAGAGAUGAGAUCUUUGCCACAGCCAAAGAGAAUGAGAAGAAAGCCAAGAGCUUGGAAGCAGACCUCAUGCAGCUACAAGAGGACCUCGCCGCCGCUGAGAGGGCUCGCAAACAAGCGGACCUCGAGAAGGAGGAACUGGCAGAGGAGCUGGCCAGUAGCCUGUCGGGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-156.50 kcal/mol

Ensemble Metrics

Free Energy: -165.73

Frequency: 0.0000

Diversity: 132.16

Structure Visualization

Structure Prediction

MFE Structure Prediction

..(((((...(.(((((((.....((.....))......))))))).)...)).....(((((((((....(((((((((........(((((..((.((...)).)).......)))))...(((((((...(((....((((((..(.(((..........))).).......((....))...((.((((..(((((.............)))))..)))).)).((((((.(((...(((((...((..((((.......))))..))...)))))((((..(.((((..(((...))).))))).)))).))).))))))....)))))).....)))...)))))))...........((((((((..............................(((((...((((.((((...((((.....(((...)))......)))).)))).)).))...)))))(..((((......))))..))))))))))))))))))))).)))))))))....

Thermodynamic Ensemble Prediction

.{(((({{{.({(((((,..(((.,,(,{,.{{{|...,||{||||{,...,}..,.,||||||}||,...|||||||||}.......|||||,,||{{....||,||.,..{{{{{......(((((((...(((....(((((({.(.(((.,........))).).......((....))...((.((((..(((((.............)))))..)))).)).((((((.(((...(((((...((..((((.......))))..))...)))))((((..{.((((..(({...})).)))),.)))).))).))))))..,.)))))).....)))...)))))))..........{((((((....},}}}}}}...,.........,{|,...}}))}}...,...||||,|{,.||,.},.|||}.||||{{{{{{.||..,|||}}{(((......)))}.((((......)))).,{||||,|}}},,))})))})).)))))))))....