Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0008600

Sequence Length

312 nt

GC Content

0.5385

CUGGACGAGGAGAUGGAGGCCAAGCAGAACCUGGAGCGCCACAUCUCCACUCUCAACAUCCAGCUCUCCGACUCGAAGAAGAAGCUGCAGGACUUUGCCAGCACCGUGGAAGCUCUGGAAGAGGGGAAGAAGAGGUUCCAGAAGGAGAUCGAGAACCUCACCCAGCAGUACGAGGAGAAGGCGGCCGCUUAUGAUAAACUGGAAAAGACCAAGAACAGGCUUCAGCAGGAGCUGGACGACCUGGUUGUUGAUUUGGACAACCAGCGGCAACUCGUGUCCAACCUGGAAAAGAAGCAGAGGAAAUUUGAUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-91.30 kcal/mol

Ensemble Metrics

Free Energy: -97.30

Frequency: 0.0001

Diversity: 46.24

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....(((((((..(((....(((...)))....))).)))))))..((((..(.(((((..((((.((((......)).(((((((....))).))))...)))).))..))))).)..))))....(((((((..((......))..)))))))..))))(..((((((.........((((((..........(((......))).....((((((((((....)))))).).)))(((((((......)))))))))))))..))))))((((...)))).......((((.....))))....)

Thermodynamic Ensemble Prediction

((((....(((((((..(((....(((...)))....))).))))))).{((((..{.((((({{,(((,,{((......)).(((((({....}))}})))...})))}}),.})))).),,))}}....(((((((..((......))..)))))))..))))(..{(((((.........((((((..........(((......))).....((((((((((....)))))).).)))(((((((......)))))))))))))..)))))}{((,..,|}},.......|||{.....})))..,.)