Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0010700

Sequence Length

565 nt

GC Content

0.6018

GCUUGACGAUGAAAUCGCUCAGAAGAACAAUGCCCUGAAGAAGAUCCGGGAGCUGGAGGGCCACAUCUCAGACCUCCAGGAGGACCUGGACUCAGAGCGGGCCGCCAGGAACAAGGCUGAAAAGCAGAAGCGAGACCUCGGCGAGGAGCUGGAGGCCCUAAAGACAGAGCUGGAAGACACACUGGACAGCACAGCCACUCAGCAGGAGCUCAGGGCCAAGAGGGAGCAGGAGGUGACGGUGCUGAAGAAGGCCCUGGAUGAAGAGACGCGGUCCCAUGAGGCUCAGGUCCAGGAGAUGAGGCAGAAACACGCACAGGCGGUGGAGGAGCUCACAGAGCAGCUUGAGCAGUUCAAGAGGGCCAAGGCGAACCUAGACAAGAAUAAGCAGACGCUGGAGAAAGAGAACGCAGACCUGGCCGGGGAGCUGCGGGUCCUGGGCCAGGCCAAGCAGGAGGUGGAACAUAAGAAGAAGAAGCUGGAGGCGCAGGUGCAGGAGCUGCAGUCCAAGUGCAGCGAUGGGGAGCGGGCCCGGGCGGAGCUCAAUGACAAAGUCCACAAGCUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-185.20 kcal/mol

Ensemble Metrics

Free Energy: -194.94

Frequency: 0.0000

Diversity: 123.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((...)))).)))).........(((((........(((((...)))))..(((.((((((...((((...))))..(((((((..(((((((((.((((.......(((((...((....))......)))))......)))).)))))..........((((..((.....))...)))).......((((...(((.(((((((((.......((((...(....)..))))......))))))))............).)))..)))))))).))))))))))))).)))....((.(((....)))))......((((...))))..(((((.....))))))))))..(((....)))...........(((....)))...................((((((.((((.(....).)))).))))))))(..((((...(((((...........((..(((.(.(((.(.(.(.(....((((((.......)))))).....).).)).)))).)))....))...........)))))...)))).)

Thermodynamic Ensemble Prediction

((((({(({(...}})).||},.........(({(((,......{(({{|..|{{{{{{,,{.,,,,,,...||||}}},.,,.}||||||||||,||(((((.((((...,...(((((...((....))......)))))......)))).)))))..........((((..((.....))...)))).,}}}|.((({,,.,|,}|{(((((((.......((((...(....)..))))......)))))))}.........,|||||||{.|||}||||||||}},,},},||.|}}.....(,(((....)))})},,,..{{{|,..}}}}.,)))))))..)))).).))))|.,{(,,..}}}...........{((....))).............,,.,.(((((((.((((.(....).)))).))))))),|..((((...(((((.........,.{{..(((.(.(((.(.{.(.(,...((((((.,...,.))))))..},.).}.}).)))).)))....)),..........)))))...)))).)