Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0011600

Sequence Length

795 nt

GC Content

0.5572

GAUGAGAUCCUGGUCAUGGAUGAUCAGAACAAUAAACUAUCAAAAGAACGAAAACUCCUUGAGGAGAGGAUUAGUGACUUAACGACAAAUCUUGCAGAAGAGGAAGAAAAGGCCAAGAAUCUUACCAAGCUGAAAAACAAGCAUGAAUCUAUGAUUUCAGAACUGGAAGUGCGGCUAAAGAAGGAAGAGAAGAGCCGACAGGAGCUGGAGAAGCUGAAACGGAAGCUGGAGGGUGAUGCCAGCGACUUCCACGAGCAGAUCGCUGACCUCCAGGCGCAGAUCGCAGAGCUCAAGAUGCAGCUGGCCAAGAAGGAGGAGGAGCUGCAGGCGGCCCUGGCCAGGCUUGACGAUGAAAUCGCUCAGAAGAACAAUGCCCUGAAGAAGAUCCGGGAGCUGGAGGGCCACAUCUCAGACCUCCAGGAGGACCUGGACUCAGAGCGGGCCGCCAGGAACAAGGCUGAAAAGCAGAAGCGAGACCUCGGCGAGGAGCUGGAGGCCCUAAAGACAGAGCUGGAAGACACACUGGACAGCACAGCCACUCAGCAGGAGCUCAGGGCCAAGAGGGAGCAGGAGGUGACGGUGCUGAAGAAGGCCCUGGAUGAAGAGACGCGGUCCCAUGAGGCUCAGGUCCAGGAGAUGAGGCAGAAACACGCACAGGCGGUGGAGGAGCUCACAGAGCAGCUUGAGCAGUUCAAGAGGGCCAAGGCGAACCUAGACAAGAAUAAGCAGACGCUGGAGAAAGAGAACGCAGACCUGGCCGGGGAGCUGCGGGUCCUGGGCCAGGCCAAGCAGGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-243.40 kcal/mol

Ensemble Metrics

Free Energy: -257.26

Frequency: 0.0000

Diversity: 254.18

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((((((((((((((.((.........))))).............((((....))))((((((..((.(((.........((((....))))........))).))..))))))..((.(((........))).)).)))))))))((((....)))).((.(((((................)))))))..((((((...(((((.........(((((.........)))))..(((((((.(((.....)))..((((((((((...((((..(((((.....(((((((..((........))...)))))))(((.......))).)))))..)))).....)))..............(((.((......)).)))..)))))))(((.((((((...((((...))))..(((((((..(((((((((.((((.......(((((...((....))......)))))......)))).)))))..........((((..((.....))...)))).......((((...(((.(((((((((.......((((...(....)..))))......))))))))............).)))..)))))))).))))))))))))).))).......(((....)))))))))).((((...)))))))))...))))))...(((((....))...)))...........(((....)))..................(((((((.((((.(....).)))).))))))).....))))).

Thermodynamic Ensemble Prediction

..,,.,.((((((((({{{{{|||}||............||.............((((....))))((((((..((.({{.........((((....}})),...,...})}.))..))))))..{,.(((........))).}}.}}}}}})}}||||...,||||,{({(((((................))))).}...{((({....||||.....,,..{{(((,{{,,....}||||,|||||}.,,,|,,,.}})))}.}||||}}{{{,...,}}}.,,{{||....|||,{{({{((.....{{...((((.(((({{,{..(((((((((((,(((,(({{...,}}},||}..........(({(({,......{{{|{|..|||||||{{{.{,{{{{...|||||}},.|,.|||||||||||,||(((((,(({{.......(((({...((....)).....,}))}}.....,)))).)))))..........((((..{(.....})...)))).}}||,.(({{.,.,|,}|{(((((((.......((((...(....)..))))......)))))))}..........}}||||||.|||}|||||||}}},,}}},}},}}}.....{,(((....)))})},,,..{|||,..}}}}.})))}}})..))),.},))))}.,{|,,..}))...........{((....))).,..........}})}}.))))))))))).,)))))).)))).,,)).))))..,)}))).