Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0025000

Sequence Length

403 nt

GC Content

0.4963

GGCAAAUUCAUCCGCAUCAACUUCGACGUCACGGGUUACAUCGUGGGAGCCAACAUUGAGACCUAUCUGCUAGAAAAAUCACGGGCAAUUCGCCAAGCCAGAGACGAGAGGACAUUCCACAUCUUUUACUACAUGAUUGCUGGAGCCAAGGAGAAGAUGAGAAGUGACUUGCUUUUGGAGGGCUUCAACAACUACACCUUCCUCUCCAAUGGCUUUGUGCCCAUCCCAGCAGCCCAGGAUGAUGAGAUGUUCCAGGAAACCGUGGAGGCCAUGGCAAUCAUGGGUUUCAGCGAGGAGGAGCAGCUAUCCAUAUUGAAGGUGGUAUCAUCGGUCCUGCAGCUUGGAAAUAUCGUCUUCAAGAAGGAAAGAAACACAGACCAGGCGUCCAUGCCAGAUAACACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-97.00 kcal/mol

Ensemble Metrics

Free Energy: -106.73

Frequency: 0.0000

Diversity: 147.87

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((....................((((((...((((.((((.((((...................(((((...........(((.....(((.((((((.....(((((((........(((...........)))((.(((((((....(((((.((((......)))))))))....))))))).)).........)))))))...)))))).))).....)))))))))))).))))...((.((((((......((((((((.(((((.....))))).))))).)).)..)))))).)).(((...(((((((((((((......(((........))).)))))))))))))...)))..........)))).))))))..))))...........

Thermodynamic Ensemble Prediction

(((,.......,,((,((....{{{.{{((.,(({{{.,.,,,(((({,,,.....|{{{,,,,.||{,,{.|.....,,..((((,....{{.((((((..,..(((((((.......,{{{..........,},|{(.(((((((....(((((.((((......)))))))))....))))))}.}}.........))))))),..)))))).))))}}.}}}})}}))}}},,)})).}}}}}}}|{{{{|{,..{{{{{({,{(({({,,,,|}||||||}}|,||,.,..,,,}).,,,,|||,,.|||,,||||||,|,.,}|||}}}}..|||{||...,,,,,|||||,,...,)),,)}........))}))),}},.}))).,......,.,