Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0025900

Sequence Length

524 nt

GC Content

0.5153

AGGCGAGUCUGGAGCCGGGAAAACCGAAAACACCAAGAAGGUCAUUCAGUACCUGGCCGUGGUGGCCUCCUCCCACAAGGGCAAGAAAGACACAAGUAUCACGCAAGGCCCAUCUUUUGCCUACGGAGAGCUGGAAAAGCAGCUUCUACAAGCAAACCCGAUUCUGGAGGCUUUCGGCAACGCCAAAACAGUGAAGAACGACAACUCCUCACGAUUCGGCAAAUUCAUCCGCAUCAACUUCGACGUCACGGGUUACAUCGUGGGAGCCAACAUUGAGACCUAUCUGCUAGAAAAAUCACGGGCAAUUCGCCAAGCCAGAGACGAGAGGACAUUCCACAUCUUUUACUACAUGAUUGCUGGAGCCAAGGAGAAGAUGAGAAGUGACUUGCUUUUGGAGGGCUUCAACAACUACACCUUCCUCUCCAAUGGCUUUGUGCCCAUCCCAGCAGCCCAGGAUGAUGAGAUGUUCCAGGAAACCGUGGAGGCCAUGGCAAUCAUGGGUUUCAGCGAGGAGGAGCAGCUAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-139.90 kcal/mol

Ensemble Metrics

Free Energy: -151.65

Frequency: 0.0000

Diversity: 160.12

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.((.(((((..(((.....))).....(((.....)))..)))))...)).)))(((((.((.((((((.....((((......((........)).......))))....(((((....(((.(((((......))))))))....))))).....((((((((..(((((((...)))......((((.((........)).))))(((.(((.........))).)))((((.((......)))))).((((.((((...................(((((...........(((.....(((.((((((.....(((((((........(((...........)))((.(((((((....(((((.((((......)))))))))....))))))).)).........)))))))...)))))).))).....)))))))))))).))))..))))..))))))))...(((((((.(((((.....))))).))))).)).)))))))).)))))

Thermodynamic Ensemble Prediction

.(((.((,(((((..(((.....))).....(((.....)))..))))).,.)).)))(((((.({{((((((.....((((..,...{(,....,,.,,.......)))).,,.{((((....(({{{((((......))))))))....)))}}.,,{.{{{((((({,{{{{{{,...(((..,...((((.((........)).)))),.|,.))).......,|||,,||..,,,||,.||,.}|||||...,,}|||||}},.....{{{{{,{{,{|{{{{,{.....,|..((((,....{{,{(((((..,..(((((((...,.,.,{({,.........,|,{((.(((((((..,,((({{.{{((,,,,..}}})))))),,,,})))))}.},......,,,)))))))}..)))))}.}})}}}.,}}})}}))}}},,)))).})})),})})}}}},...|{|||{{.{{{|||,..,))))),)))))}}).)))))))).)))))