Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_MYH11_0026600

Sequence Length

380 nt

GC Content

0.5079

AGGCGAGUCUGGAGCCGGGAAAACCGAAAACACCAAGAAGGUCAUUCAGUACCUGGCCGUGGUGGCCUCCUCCCACAAGGGCAAGAAAGACACAAGUAUCACGCAAGGCCCAUCUUUUGCCUACGGAGAGCUGGAAAAGCAGCUUCUACAAGCAAACCCGAUUCUGGAGGCUUUCGGCAACGCCAAAACAGUGAAGAACGACAACUCCUCACGAUUCGGCAAAUUCAUCCGCAUCAACUUCGACGUCACGGGUUACAUCGUGGGAGCCAACAUUGAGACCUAUCUGCUAGAAAAAUCACGGGCAAUUCGCCAAGCCAGAGACGAGAGGACAUUCCACAUCUUUUACUACAUGAUUGCUGGAGCCAAGGAGAAGAUGAGAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-84.80 kcal/mol

Ensemble Metrics

Free Energy: -93.62

Frequency: 0.0000

Diversity: 132.10

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(.((((((..(.((((((...((.(((...(((.....)))..))).)).)))))))..((.(((((((........((((......((........)).......))))(((.(((((....(((.(((((......))))))))....)))))...)))...))))))).))(((...)))......((((.((........)).)))))))))).)...((((((..(.((..((((..((((...((((....(((((...........((......))...........)))))(((.....))).))))...)))).))))...(((((((((...........)).)).)))))....)).)..))))))..

Thermodynamic Ensemble Prediction

.{{((,,(((((.((((({...{|,|{{...(((.....|||..}}}.}}.)))}}}|,{|||||||{,((({{{{..((((..,...,{,....,,.,,.......)))).,,,{{({(,,..((({(((((......))))))))....}}}||,(({....|||{({|,,,{(({,,.||{......((((.((........)).))))|,||{||}.......,|}}.,,,..||||,,.|,,.}}|}||.....}||}}}}.,.....,}|},,},.}}|....,.....}},}}(((.....)))..})),)},.)).},|||...}}}.{((({{{,.{{...||.||},,,}}},}.})}}))))))).,..