Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0001000

Sequence Length

300 nt

GC Content

0.3467

GGACAACUGUGUUUGUUUACUUAUCAGACUGCACUAGAGGCUCUGAAUCUUUUGAGGAUCAGCACAUUAUCUUACCUUGCUAUUAUGAGUAUUUAACAUAGUAUCUGGCAUUUUGUGGUGUUUAGUGAACUUUACUGUGGAUAUUUUCUCUCAUCUUUGGUAUAGUUAGUUUGCUUGUUUCAGUCAUAUUCAGCUUCGGCACAAAUCUUAUCUUUGCAGGCUAUUCUGAUUCUUUUAAUUUCUACAUUUUCCUCUUGCUUUAACAUUUCAGUUUUUAUUUUUGAGUGGGGGAUGAUUGGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-51.80 kcal/mol

Ensemble Metrics

Free Energy: -58.91

Frequency: 0.0000

Diversity: 89.27

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((......))))))(((.((((..((.(((((((((....(((......((((((((((((..((((......((((((((((.........))))))....))))......))))....)))((((.(((((.((((..........)))).))))).)))).....((((((..............((....))...............))))))....))))))))).....)))........)))))......(((......)))..........)))).))..)))).)))

Thermodynamic Ensemble Prediction

((((((......))))))(((.((((..((.((((,((((,..,(((,...{{((((((,((((.((((.{{{(({.,{,,{..{{(((.......{{{((({.,.||((({....}})),,.}},},.,..}))))}},,|,......},,}}...,)))).)),}))}.}))}.||}}}}|....}}}}}}}}},,||,,,{,........,,)}||}},...}}}},,,,,................}}}},.,....,,,....,,},..........,)))).))..)))).)))