Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0010500

Sequence Length

351 nt

GC Content

0.3761

CCAAGACAUGCAGUAAAAUUAUUAUCAGUUCUUAAUCAGAUGCCACAGAGACACGGUCCUGAUACUUUUUUCAAUUUCCCUGGUUGUAGCGCUGCGGCAAUUGCCUUGCCUCCUAUUGCAAAGUGGCCUUAUCAGAAUGGCUUCACCUUAAACACUUGGUUUCGUAUGGAUCCAUUAAAUAAUAUUAAUGUUGAUAAGGAUAAACCUUAUCUUUAUUGUUUUCGUACUAGCAAAGGAGUUGGUUACUCUGCUCAUUUUGUUGGCAACUGUUUAAUAGUCACAUCAUUGAAGUCCAAAGGAAAAGGUUUUCAGCAUUGUGUGAAAUAUGAUUUUCAACCACGCAAGUCACAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-70.10 kcal/mol

Ensemble Metrics

Free Energy: -77.15

Frequency: 0.0000

Diversity: 130.45

Structure Visualization

Structure Prediction

MFE Structure Prediction

....(((.(((......(((((((.(((((.(((((.(((((...(((((.((.((...(((........)))....)).))((((((....))))))....(((....(((((.((((...(.((((..........)))).)(((..........)))...(((((((..((.((((.............(((((((.....))))))))))).))..)))))))..)))))))))..)))..)))))..))))).))))).)))))..)))))))((((...((((((.((.........)).))))))...))))(((((......))))).....))).)))....

Thermodynamic Ensemble Prediction

....(((.(((.({,,,,,{{{{,,{,{,,,{..,,,,|,,|.....,.,{((((({.((((.{{{{{{{{{.......{{|{{,{,{{.{{{{{(((,...}}}||||,.....,,}}},.||||||,.,,|||.,{((||,{{,,...,,,..,,|||{,,{{{(({{..{({(((,.....,}||}}..(((((((.....))))))),,))})}..}}}}}}|{{((({{{((((.{{....,).)))).))))))))),,}|)}|,}}))})},,||,...|}}}}.||,..}}}}))))}.,)))).}}))))}{{{{...,,.)))}......))).)))....