Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0030000

Sequence Length

475 nt

GC Content

0.4042

CCAUUCUACAAAGUCUGUAAUGGAUUUUGUCAAUAGCAAUGAAAAUAUUAUUUUUGUACAUAACACAAUUCACCUCAUUUCCCAAAUGGUAGACAACAUCAUCAUUGCUUGUGGAGGAAUUUUACCUUUGCUCUCUGCUGCUACAUCACCAACUGGUUCUAAGACGGAAUUGGAAAAUAUUGAAGUGACACAAGGCAUGUCAGCUGAGACAGCAGUAACUUUCCUCAGCCGGCUGAUGGCUAUGGUUGAUGUACUUGUGUUUGCAAGCUCUCUAAAUUUUAGUGAGAUUGAAGCUGAGAAAAACAUGUCUUCUGGAGGUUUAAUGCGACAGUGCCUAAGAUUAGUUUGUUGUGUUGCUGUGAGAAACUGUUUAGAAUGUCGGCAAAGACAGAGAGACAGGGGAAAUAAAUCUUCCCAUGGAAGCAGUAAACCUCAGGAAGUUCCUCAAAGUGUGACUGCUACAGCAGCUUCGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-116.30 kcal/mol

Ensemble Metrics

Free Energy: -125.33

Frequency: 0.0000

Diversity: 160.37

Structure Visualization

Structure Prediction

MFE Structure Prediction

(......(((((((((.....)))))))))....((((((((...........((((.......)))).(((((.............))).))........)))))))).(((((((.......)))))))((((.((.((.((((.((.((((((((.((....((.((((.....(((((((.(..((.((((((((((((((.(((((..((((.....((..(((((.....)))))..))......))))..))))).(((.(((.((((...)))).))).))).))))))......)))))))).))..).)))))))...)))).)))).)))))))).)).)))).)).))))))..((((((....((((......))))...))))))(((((.......))))).....((((((..((((.((((...))))...)).)).))))))......)((....))

Thermodynamic Ensemble Prediction

(,,{...(((((((((.....))))))))),{..((((((((...........{(((.....,,}}},.,,,{{.,,,,.....,,,))}.},........)))))))).{||((((({..({,(|{{(({((((,(((({.{{{(,{({{,{{{{((((,,...||.,)))),...,,{||{{,|,.{{.{{{{{{|||||||{,|||||,.{|||}..}}||}}(((((.....))))).,)),,,,..}}||{{|}}}},|||,(((.((({...}))).))).|||,|||||,......}}}}}}||,|}..|,|}}|||{((((({..,{{{,,..}}},}}))})))},))},},)}},.((((({....((((......))))...))))))(((({.......)))))..,..((((((..(({{.((({...))))...}).}}.)))))).},.}})||,,}}))