Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0035500

Sequence Length

439 nt

GC Content

0.4237

AAACACCUGCUGCAUUUCCAGACACCAUAAAAGAAAAAGAAACACCAACUCCUGGUGAAGAUAUUCAGGUAGAAAGUUCAAUUCCCCAUACAGAUUCAGGAAUUGGAGAGGAGCAAGUGGCUAGCAUCCUGAAUGGGGCAGAAUUAGAAACAAGUACAGGCCCUGAUGCCAUGAGUGAACUCUUAUCCACUUUGUCAUCCGAAGUGAAGAAAUCACAAGAGAGCUUAACUGAAAAUCCUAGUGAAACGUUGAAGCCUGCAACAUCCAUAUCUAGCAUUAGUCAAACCAAAGGCAUCAAUGUGAAGGAAAUACUGAAAAGUCUUGUGGCUGCUCCAGUUGAAAUAGCAGAAUGUGGCCCUGAACCUAUCCCAUACCCAGAUCCAGCAUUGAAGAGAGAAACACAAGCUAUUCUUCCUAUGCAGUUUCAUUCCUUUGACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-90.40 kcal/mol

Ensemble Metrics

Free Energy: -97.23

Frequency: 0.0000

Diversity: 88.42

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((((((((......))).....................(((((.....)))))........)))))......................((((..((.((.(((.(((..((.(.(((((.(((.(((..((((((((.................(((......)))(((((......))))).(((((((.....)))))))......(((((((...((((.........((((......(((((((.((((..........((........))..........)))).)))))))..)))).........)))))))))))))))))))..........))).)))))))))))..))).))).)).))..))))..((((.((((((((.........)).))))))..)))).))))(..((....))..)

Thermodynamic Ensemble Prediction

((((,,((((((..,,,,}}}.,...................(((((.....)))))......,,}}}}}.,....,{{{{{{{{.......,,,{..||}||}|||.{((..(,,(.((({{,(((.(((..((((((((............,....(((......))),{{{(,....|}||,,.(((((((.....)))))))..,,..|((({((,..,{{{.........((((......(((((((.((((..........{{........))..........)))).)))))))..))))....,....,})))))))},))))))))..........))).})))})))})}..))}.}}}.,,.,}..),,}..((((.((((((((.........)).))))))..)))).))))(..((....))..)