Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0038300

Sequence Length

420 nt

GC Content

0.3119

GUAGGGAGACUCUUCAAUAAAUAGUGUUGGGAAAAUUGGCUAUCCAUGUUUAGAAAAUAAAAUGAGACCCUCAUUUUACAUCACACACAAAAAUCAACUGAAAAUGAAUUAAAAACUUAAAUGUAAGACCUACAACUAUGAAACUACUAGAAGAAAAUAUAGUGAGAAAUCUCCAUGACAUUGGUCCAAGCAAGGAUUUUUGGAUGUGACUCUAAAAACACAGACAACAAAAGCAAAGACAAAUGGGAUUGCAUCAAACUAAAAAUCUUCGGCACAGCAAAGAAAACAAACAACAGUUAAGAAGUAAUCUACAGAGUAGGAGAAAAUAUUUGCAAACUAUACAUCUAACAAGUGGCUAAUAUCCAAAAUAUAUAAGUAACUUAACUAAGCCAGAAAACAAAUAACUUGAUUUAAAAAUGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-53.00 kcal/mol

Ensemble Metrics

Free Energy: -62.70

Frequency: 0.0000

Diversity: 107.20

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((........(((((((.....)))))))........))))((((.((((((...(((((((((...)))))))))..(((((..((((((((..........................((((.....))))((((((...((......))....))))))(((....)))...(((....)))........))))))))..))))).(((........)))........((((...(....)...)))).((((..........((((((......................((((.((.(((.......(((((........)))))........))).))))))((((.(((.((((.......)))).))).))))......))).)))..........)))))))))).))))

Thermodynamic Ensemble Prediction

((((.,,...{{{{(((((.....)))))))}...}}..))))((((.((((((...(((((((((...)))))))))..(((((..((((((((...,.................,,,..{{{{.,...}}},{{((({...{{......}}....}}))))(({....)}|,,.,,,..,})}}........))))))))..))))}.{{{........}},........{{,,...,...,|{{{||||.{{..........{{((.,((...}}.}})}............))}..||.|||}}}}.,.,,||{|.......,,}}),,...,,.},,.}}},,|{{{({(((.{{{{.......}},,.||}..,},..,,.}))),.............})}.)))))}.))))