Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0040600

Sequence Length

269 nt

GC Content

0.4275

CCAAUUGCAUGAUUUCUGGCGUUUGGAUUACUGGGAAGAUGAUCUUCGUCGAAGGAGACGAUUUGUUCGCAAUGCAUUUGGCUCCACUCAUGCUGAAGCAUUGCUGAAAGCUGCAAUAGAAUAUGGCACGGAAGAAGAUGUAGUAAAGUCAAAGAAAACAUUCAGAAGUCAAGCAAUAGUGAACCAAAAUGCAGAGACAGAACUUAUGCUGGAAGGAGACGAUGAUGCAGUCAGUCUGCUACAGGAGAAAGAAAUUGACAACCUUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-58.70 kcal/mol

Ensemble Metrics

Free Energy: -64.21

Frequency: 0.0001

Diversity: 74.75

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..(((((.((((((((((.((((((((((((....)).))))))(((((......)))))....((((((((((.((((((.........))))))))))))).))).((((((.......................))))))...........))))..)))))))))).)))))................(((......)))..)(((.((((...((((...((((.....))))..............))))....)))).)))

Thermodynamic Ensemble Prediction

(..,{{{{.(({(((((({,(((((({(((((,...}}.|||}||(((((......)))))....{{{(((((((.((((((.........))))))))))))).}},.((((({........,.,,...........}))}}}....}}.....|,,}..))}))))))).}}},),)}},.}},,,.|||||}|,}}...,,,.,)(((.{(({{{{((((....,.|}}.}})),},.}}}.,....,...})}....)))),)))