Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NBEA_0048400

Sequence Length

228 nt

GC Content

0.4167

GCCUCAGAGGAGCUCCAGGAUACUCCUUGGAUCAAGCCCACCAUCUUCCCAUUGAAAUGGAUCCAUUAAUAGCCAAUAAUUCAGGUGUAAACAAACGGCAGAUCACAGACCUCGUUGACCAGAGUAUACAAAUCAAUGCACAUUGUUUUGUGGUAACAGCAGAUAAUCGCUAUAUUCUUAUCUGUGGAUUCUGGGAUAAGAGCUUCAGAGUUUAUUCUACAGAAACAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.00 kcal/mol

Ensemble Metrics

Free Energy: -43.80

Frequency: 0.0000

Diversity: 87.67

Structure Visualization

Structure Prediction

MFE Structure Prediction

((......((.((((((((......))))))....)))).((((.(((.....)))))))...........))(......((.(.(((......))).).))........(((........)))..((((((.((((....)))).)))))).....(((........))).........(((((((((((((((........))))))).....))))))))....)

Thermodynamic Ensemble Prediction

(,{{{...(({(((({(((,...}}))}|||....|||,.{{,{.,{{,,,..,,,}})).,,,.......{{{.........||||,......,,}||.|,,,.,.,..||{,,,,.,,,|||{.{{{{{{.{{{{....}))).}))))},,..,,(({{{{{,..,,,......}}}|||||||||||||||....,,}}))),)))}|,.,||,,,,)),..,)