Sequence Details

BLAST PRIMER
Symbol
hsa_NEIL3_0003400
Sequence Length
421 nt
GC Content
0.3682
AUUCAGUGCUCAAGAGUGAAGAAAAUUCUACUGUCUUUAGCCACUUAAUGAAGUACCCGUGUAAUACUUUUGGAAAACCUCAUACAGAAGUCAAGAUCAACAGAAAAACUGCAUUUGGAACUACAACUCUUGUCUUGACUGAUUUUAGCAAUAAAUCCAGUACUUUGGAAAGAAAAACAAAGCAAAACCAGAUACUAGAUGAGGAGUUUCAAAACUCUCCUCCUGCUAGUGUUUGUUUGAAUGAUAUACAGCACCCCUCCAAGAAGACAACAAACGAUAUAACUCAACCAUCCAGCAAAGUAAACAUAUCACCUACAAUCAGUUCAGAAUCUAAAUUAUUUAGUCCAGCACAUAAAAAACCGAAAACAGCCCAAUACUCAUCACCAGAGCUUAAAAGCUGCAACCCUGGAUAUUCUAACAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-62.70 kcal/mol
Ensemble Metrics
Free Energy: -72.08
Frequency: 0.0000
Diversity: 89.85
Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((((.((((..(.(((....))).)..)))).)).))))...((.(((.((.(((((..(((((((............))))))).....((....)).....)))))..)).))).))....(((((((.((((..((((....))))..)))).(((((..........)))))((((..(((((((((((.((((((..........)))))).).))))))))))))))........................))))))).....(((((.........................)))))................))))((...(((....((((((..................((((......(((.......))).......)))).....))))))....))).))
Thermodynamic Ensemble Prediction
(((({(((((.((((..(.(((....))).)..)))).))}})))...,{,,{{....{(({..{(((((((({.....,,...,,}}{({(((((.{{,{((.....}}}...{{{......}},.,.}}))))))|||({{({{{....,})}|||||,.{{{{(,,........}}}}}{,{{..((((((((((,.((((((..........)))))).,.))))))))))}))}..,,,.............|,......}.........{{,,,...,,.....}}}}...})))}.,,}),,,...},,..,,,,,,..))))((...{{{....((((((..................((((......(((.......))).......)))).....))))))....}}}.))
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