Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NFATC3_0006600

Sequence Length

393 nt

GC Content

0.4377

GCCUUGGCCCUGCAGUUUUUCCAUUUCAGUACUGUGUAGAGACUGACAUCCCUCUCAAAACAAGGAAAACUUCUGAAGAUCAAGCUGCCAUACUACCAGGAAAAUUAGAGCUGUGUUCAGAUGACCAAGGGAGUUUAUCACCAGCCCGGGAGACUUCAAUAGAUGAUGGCCUUGGAUCUCAGUAUCCUUUAAAGAAAGAUUCAUGUGGUGAUCAGUUUCUUUCAGUUCCUUCACCCUUUACCUGGAGCAAACCAAAGCCUGGCCACACCCCUAUAUUUCGCACAUCUUCAUUACCUCCACUAGACUGGCCUUUACCAGCUCAUUUUGGACAAUGUGAACUGAAAAUAGAAGUGCAACCUAAAACUCAUCAUCGAGCCCAUUAUGAAACUGAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.90 kcal/mol

Ensemble Metrics

Free Energy: -83.98

Frequency: 0.0000

Diversity: 125.50

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((.(((..((((((((((.(((.........))).)))))))).))(((((.(((..............((((((.((..((((......................)))))).)))))))))...)))))...........))).)))...(((((....(((((((...(((((((.................)))))))((((((.(...((((......(((((..............)))))......)))).).))))))............((((.(((((((....((((..(((((((......)))).)).)..))))....)))).........))).)))).........(((......))).))))))).....)))))

Thermodynamic Ensemble Prediction

((,..(({,.{{(((((((,.{{,...,,.,{{|,|.||||||||{{{{({{{,{......{{({{.....,(((({{((({((,,{{{({.,,....,{,...,..,,|||||{|},|||{,.{....}|,||},.,|}||}}).,,}}}..|}}}..,,,.,,}})))}}}||})}}}}}..}}}}}....||,}}}....,|,|||}.}}}|||}}}..,,(((((..............))))}...,....)},,)))}}},...,,...,,,,((((.(((((((....((((..{((((((......)))).)).,..))))....))))...,,....))).)))).........(((......)))........}},},)),})