Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NFATC3_0008100

Sequence Length

363 nt

GC Content

0.4242

CACAUCUUCAUUACCUCCACUAGACUGGCCUUUACCAGCUCAUUUUGGACAAUGUGAACUGAAAAUAGAAGUGCAACCUAAAACUCAUCAUCGAGCCCAUUAUGAAACUGAAGGUAGCCGAGGGGCAGUAAAAGCAUCUACUGGGGGACAUCCUGUUGUGAAGCUCCUGGGCUAUAACGAAAAGCCAAUAAAUCUACAAAUGUUUAUUGGGACAGCAGAUGAUCGAUAUUUACGACCUCAUGCAUUUUACCAGGUGCAUCGAAUCACUGGGAAGACAGUCGCUACUGCAAGCCAAGAGAUAAUAAUUGCCAGUACAAAAGUUCUGGAAAUUCCACUUCUUCCUGAAAAUAAUAUGUCAGCCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-75.80 kcal/mol

Ensemble Metrics

Free Energy: -83.77

Frequency: 0.0000

Diversity: 68.38

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((((((....((((..(((((((......)))).)).)..))))....)))).........))).)))(....((((..((((((((..((.................((((((.((((((.((....))...(((.(.(((....))).).)))..)))))).)))))).........(((((((((........)))))))))....)).)))))).))..)))).....((((((((((....)))))))).))...((((......)))).(((......)))...((((....((((.((((.((....)).)))).)))).....)))).((((..........))))...)

Thermodynamic Ensemble Prediction

(((.(((((((....((((..{((((((......)))).)).,..))))....)))).........))).)))(....,,,,..((((((((..{(.,..........,,...((((((.((((((.{{....||,..,||.({((,...,))),}.}},..)))))).)))))).........(((((((((........)))))))))....}).)))))).|}..,,,,.|,..{{((((((({....}))))))).)}.,,{{{({,..,.||||.((,...},.,,}...{{{,....{((,.((((.((....)).)))).,)))....,)))).|{{{........,.))}}...)