Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NFIX_0001800

Sequence Length

250 nt

GC Content

0.4640

GGUGUUCAGGAUGUGCUAACCUGCGGGUGUCUGUGUGGGUGUCUGAGUGUCAGGAGGUGGGUGUCUGUGUACAAGUAUGGGUUGGGGUGUGUGUGUAUAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAUGGAGAGCCCUGUUGAUGACGUGUUCUAUCCCGGGACAGGCCGUUCCCCAGCAGCUGGCAGCAGCCAGUCCAGCGGGUGGCCCAACGAUGUGGAUGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-51.01 kcal/mol

Ensemble Metrics

Free Energy: -56.52

Frequency: 0.0001

Diversity: 94.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

(..((.((...)).))...)((((((((.(((((.((((((.(((..((((((..(.((((..((((((......))))))..(((((.....................................................................)))))...((((.(.((((((.....)))))).).)))).)))).)..)))))).))).)).)))))))))..))))............))))

Thermodynamic Ensemble Prediction

((({({((.,.{|,||,.{|((((({{,.,{{{|,|||||,,(((,.{{||||,.{,{{{{,.|||{((((((..{{({.......,}}},,.}}}))}.....................................................||}..}))|{{{..,{{|{{{{{{{{|,|||}|||}}|||,|||.}|||,}..))))|),),)}))}))).)))))}}))},.}},.},),}.,))))