Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_NFIX_0002900

Sequence Length

184 nt

GC Content

0.5761

AAUCCGGACAAUCAGAUAGUUCAAACCAGCAAGGAGAUGCGGACAUCAAACCACUGCCCAACGCUCCUGUUGCAACAGCAUCAGGGCCCAACUUCUCCCUGGCGGACCUGGAGAGUCCCAGCUACUACAACAUCAACCAGGUGACCCUGGGGCGGCGGUCCAUCACCUCCCCUCCUUCCACCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-45.50 kcal/mol

Ensemble Metrics

Free Energy: -47.38

Frequency: 0.0471

Diversity: 47.39

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((.........))))..........(((((.((((...........)))).....((.((((.(((....))).))))))......)))))((((.(((...((((.(((((((.((((.............))))...)))))))((.(((.....))).)).)))).))).))))

Thermodynamic Ensemble Prediction

.....((({.........}))}......,.,.(((({.(,((........,,.||||,....((.((((.(((....))).))))))......}}}||((((.{((...((((.(({{{{(.{,{{............,})})...)))))))((.(({.....})).)).)))).))).))})